Protein Information

Protein ZmMYB39
ZmMYB39 is a protein in the MYB family.
Information
TF Name:	ZmMYB39
Species:	Maize
TF Family:	MYB
Gene Name(Synonym):	MYB39
Uniprot ID:	K7TYD9
Subgenome:	2

Overview of domains present in v5 transcripts
	PF00249	PF13921
Zm00001eb185160_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d051149	DAPseq	sequence	fimo	position
Zm00001d051149	DAPseq	sequence	fimo	position
Zm00001d051149	ChIPseq	sequence	fimo	position
Zm00001d051149	PChIPseq	sequence	fimo	position

Zm00001eb185160_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MGRSPCCEKMGLKRGPWTAEEDRILVAHVERHGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSREEEDAIIQ
LHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLEPKPASQQAPKRKPTKKQQPQPEPEPVTTLEGPAGAVPPVAPER
SLSTTTSTTTSTADYSPASSLENAGDSFTSEEDYYQIDDSFWSETLAMTTTVDSFESGVQQAEGSFGKSAAAPSSTNDDM
DFWLKLFMQASDMQNLPQII

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00249
PF13921
PF00249
PF13921
PF00249
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Nucleotide Sequence
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CCACACAGCAAAACCACCCGCGCTC...

GRMZM2G127857_T01 from maize genome v3

Related TFome: pUT1149

Amino Acid Sequence
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MGRSPCCEKMGLKRGPWTAEEDRILVAHVERHGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSREEEDAIIQ
LHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLEPKPASQQAPKRKPTKKQQPQPEPEPVTTLEGPAGAVPPVAPER
SLSTTTSTTTSTADYSPASSLENAGDSFTSEEDYYQIDDSFWSETLAMTTTVDSFESGVQQAEGSFGKSAAAPSSTNDDM
DFWLKLFMQASDMQNLPQII

Nucleotide Sequence
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ATGAAAAATCACGATATCGCATCGC...

Zm00001d051149_T001 from maize genome v4

Amino Acid Sequence
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MGRSPCCEKMGLKRGPWTAEEDRILVAHVERHGHSNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSREEEDAIIQ
LHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLEPKPASQQAPKRKPTKKQQPQPEPEPVTTLEGPAGAVPPVAPER
SLSTTTSTTTSTADYSPASSLENAGDSFTSEEDYYQIDDSFWSETLAMTTTVDSFESGVQQAEGSFGKSAAAPSSTNDDM
DFWLKLFMQASDMQNLPQII

Nucleotide Sequence
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CCACACAGCAAAACCACCCGCGCTC...

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Protein ZmMYB39

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmMYB39 is the regulator

Interactions where ZmMYB39 is the target
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Zm00001eb185160_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G127857_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d051149_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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